Fungal Metagenomics

The fungal composition of a sample will be profiled through the amplification and target sequencing of the   internal transcribed spacer (ITS) regions using Illumina Miseq sequencing 300×2, widely used in taxonomy and molecular phylogeny. The service includes taxonomic affiliation, diversity and comparative profiling.



Soil monitoring.

Fungal-bacterial interactions in micorrizic environment

Soil fertility evaluation.

Fungal characterizartion during improve/resistent crops screening.

Health-Care: clinicians and pharma

Odontological clinics: Monitoring dental pathogens.

Consumer goods industry

Monitoring biofermentative products.

Prophylactic crisis: Zoonosis and human pathogens.


High level of advice in the experimental design

q30 quality guaranteed for almost 70% reads

Custom pipeline and different barcode available

Mixed studies with 16S bacteria metagenomics available

Service Inquiry Fungal Metagenomics

Tell us which service are you interested in and we will provide you more information. An approximate number of the samples to analyze is needed to send you a personalized offer.


    Basic information about data protection

    The personal data you provide us through this form will be used by MICROOMICS SYSTEMS S.L. to be able to fulfill your request, relate to you and, where appropriate, be able to provide you with our services. They may also be used to send you commercial or promotional communications from our entity, with your consent. You can contact us to find out what information we have about you, rectify it, delete it and request the transfer of your information to another entity (portability). To apply for these rights, you must make a written request to our address, along with a photocopy of your ID: Carrer del Dr. Aiguader, 88, PRBB Parc building of Biomedical Research of Barcelona, Laboratory 608., CP 08003, Barcelona (Barcelona). If you understand that your rights have been neglected, you can make a complaint in the AEPD ( You have an expanded information about the processing of your personal data in the “Privacy Policy” section of our website.